SDA 2024 links

Signal & Data Analysis in Neuroscience (27-505)

Second semester, 2023

Additional links

Yarden Nativ - Lesson summaries (2020)

1 - SDA in Neuroscience

2 - Stochastic processes

3 - Poisson processes

4 - Point processes

5 - Encoding, discrimination, decoding

6 - Optimization

7 - Information theory

8 - PCA & ICA

9 - Clustering

10 - The frequency domain

11 - Wavelets

Videos

Information theory - MacKay course

Information theory (Wordle example)

Books

Numerical recipes

Theoretical Neuroscience - Dayan & Abbott (pdf)

Signal processing for neuroscientists

Practical optimization

The Matrix Cookbook (pdf)

Programming

Introduction to Jupyter Notebooks

Introduction to Python, NumPy and mostly SciPy (pdf)

Introduction to python from cs231n with code examples on Colab

How to upload data into google Colab

Python exercises (1) (2)

Lectures

Bayesian decisions

Test examples

Test directory

Other resources

Ergodicity

Kernel PCA lecture

Fourier transform (YouTube movie)

Fourier series of periodic signals (Applet)

Fourier transform of spatial (image) signals

Information Theory for Intelligent People